Hi,
David- I think what you put here is the R-buffer, not the L-buffer, right? The paper you cited is great! They use 150 mM sodium phosphate buffer at pH 7.2 as an R-buffer (reducing) for the TCEP step. The L-buffer (loading) is 20 mM ammonium acetate at pH 5.2. This is used for DTPA/Lanthanide incubation.
If I recall correctly, we never had to pH the ammonium acetate because it was around pH 5-6 after dissolving in water. The low pH helps prevent metal oxidation I think.
I vaguely remember hearing that DVS/Standard Biotools switched away from using Ammonium Acetate as their L-buffer, but this may just be hearsay
We always used L-buffer for metal storage as well as DTPA loading. I bet that Ammonium Acetate is still good for DTPA loading, but maybe they found something better for long term storage?
Mike- if you decide to use Ammonium Acetate for L-buffer, I would buy the purest you can find from Sigma-Aldrich and definitely run a small aliquot in liquid mode to make sure there's no contaminating metals before using it for antibody conjugations!
Best,
Eli