2024-Emons et al-preprint

[mleipold]

"pasta: Pattern Analysis for Spatial Omics Data"
Martin Emons, Samuel Gunz, Helena L. Crowell, Izaskun Mallona, Reinhard Furrer, Mark D. Robinson
arXiv, posted 2 Dec 2024
https://doi.org/10.48550/arXiv.2412.01561

- will update when/if this is peer-reviewed and published

- reuses 2019-Damond et al-Cell Metab

[mleipold]

Now published:

Nucleic Acids Res. 2025, 53, gkaf870
https://doi.org/10.1093/nar/gkaf870

- it appears that the 2019-Damond et al-Cell Metab is now part of this imcdatasets R package: https://bioconductor.org/packages/relea ... asets.html
Damond N imcdatasets: collection of publicly available imaging mass cytometry (IMC) datasets . 2024 10.18129/B9.bioc.imcdatasets

2019-Damond et al-Cell Metab
2022-Hoch et al-Sci Immunol
IMMUcan_2022_CancerExample: used in 2023-Windhager et al-Nat Protoc
2020-Jackson et al-Nature
2020-Zanotelli et al-Mol Syst Biol