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2022-Hao et al-preprint

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mleipold

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Posts: 6001

Joined: Fri Nov 01, 2013 5:30 pm

Location: Stanford HIMC, CA, USA

Post Mon Feb 28, 2022 5:50 pm

2022-Hao et al-preprint

"Dictionary learning for integrative, multimodal, and scalable single-cell analysis"
Yuhan Hao, Tim Stuart, Madeline Kowalski, Saket Choudhary, Paul Hoffman, Austin Hartman, Avi Srivastava, Gesmira Molla, Shaista Madad, Carlos Fernandez-Granda, Rahul Satija
bioRxiv, posted February 26, 2022
https://doi.org/10.1101/2022.02.24.481684

- will update when/if this is peer-reviewed and published

- reuses 2021-COMBAT Consortium et al-preprint (2021-COMBAT Consortium et al-Cell)

"Human PBMC CyTOF dataset:
This human PBMC CyTOF dataset was generated by the COVID-19 Multi-omics Blood Atlas COMBAT
consortium, and consists of 7.11 million cells with a panel of 47 antibodies. We removed cells from sepsis
patients, yielding a remainder of 5.17 million cells. We use the normalized expression matrices as quantified
in the original study. As this dataset is used as a query dataset in this manuscript, we do not perform
unsupervised dimensionality reduction on the protein data.
Data acquisition source: https://zenodo.org/record/5139561"
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mleipold

Guru

Posts: 6001

Joined: Fri Nov 01, 2013 5:30 pm

Location: Stanford HIMC, CA, USA

Post Tue Jun 06, 2023 7:02 pm

Re: 2022-Hao et al-preprint

Now published:

Nat Biotechnol. 2023
https://doi.org/10.1038/s41587-023-01767-y

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