2024-Barbetta et al-preprint

[mleipold]

"IMmuneCite: an open-source workow for processing multiplex images and analysis of immune enriched spatial proteomic data"
Arianna Barbetta, Sarah Bangerth, Jason T.C. Lee, Brittany Rocque, Evanthia T Roussos Torres, Rohit Kohli, Omid Akbari, Juliet Emamaullee
Res Sq, posted June 13th, 2024
https://doi.org/10.21203/rs.3.rs-4571625/v1

- will update when/if this is peer-reviewed and published

- reuses 2022-Zabransky et al-Hepatology IMC as validation

- "Data and scripts to reproduce the findings of this study, including high-dimensional TIFF images, will be made available on our Github (https://github.com/julietusc) and Zenodo."

[mleipold]

Now published:

Sci Rep. 2025, 15, 9394
https://doi.org/10.1038/s41598-025-93060-y

- "Data and scripts to reproduce the findings of this study are available on our Github (https://github.com/julietusc/IMmuneCite_Manuscript)."
- contain RDS not TIFF or MCD: "Raw data is available upon reasonable request to the corresponding author. "