CyTOF data analysis
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Please be as geeky as possible. Reference, reference, reference.
Also, please note that this is a mixed bag of math-gurus and mathematically challenged, so choose your words wisely
Please be as geeky as possible. Reference, reference, reference.
Also, please note that this is a mixed bag of math-gurus and mathematically challenged, so choose your words wisely
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- Kappa & LAmbda clones in CyTOF
by msinger » Tue Feb 15, 2022 7:59 pm - 2 Replies
- 119413 Views
- Last post by DannyG
Fri Aug 05, 2022 7:17 pm
- Kappa & LAmbda clones in CyTOF
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- Topics
- Replies
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- Useful to have list of CyTOF datasets?
by mleipold » Mon May 14, 2018 4:28 pm - 5 Replies
- 8273 Views
- Last post by mleipold
Wed Dec 12, 2018 8:53 pm
- Useful to have list of CyTOF datasets?
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- separating type (lineage) and state (functional) markers
by markrobinsonca » Mon Nov 26, 2018 8:02 pm - 2 Replies
- 4518 Views
- Last post by JamesW
Tue Nov 27, 2018 5:09 am
- separating type (lineage) and state (functional) markers
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- CytofKit error messages
by jamesaries » Sat Nov 17, 2018 6:13 pm - 0 Replies
- 3194 Views
- Last post by jamesaries
Sat Nov 17, 2018 6:13 pm
- CytofKit error messages
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- Pe'er lab analysis tools are taken off the web?
by AnnaBelkina » Thu Apr 05, 2018 8:52 pm - 5 Replies
- 9319 Views
- Last post by dtelad11
Fri Nov 02, 2018 11:00 pm
- Pe'er lab analysis tools are taken off the web?
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- Phenograph - choice of settings input in to cytofkit?
by jamesaries » Tue Jun 12, 2018 2:01 pm
- 6 Replies
- 11398 Views
- Last post by albertapaul
Thu Nov 01, 2018 3:35 am
- Phenograph - choice of settings input in to cytofkit?
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- Compensated files in Cytobank
by SaraAli » Sun Sep 30, 2018 4:47 pm - 3 Replies
- 6164 Views
- Last post by sgranjeaud
Tue Oct 16, 2018 8:48 pm
- Compensated files in Cytobank
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- autogating
by xiaoxiaoUC » Mon Sep 24, 2018 10:14 pm - 0 Replies
- 3376 Views
- Last post by xiaoxiaoUC
Mon Sep 24, 2018 10:14 pm
- autogating
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- CITRUS analysis flow data - transformation warning
by selly84 » Fri Sep 21, 2018 7:49 am - 0 Replies
- 3483 Views
- Last post by selly84
Fri Sep 21, 2018 7:49 am
- CITRUS analysis flow data - transformation warning
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- Python phenograph classification
by PaulNL » Fri Sep 14, 2018 7:24 am - 0 Replies
- 4238 Views
- Last post by PaulNL
Fri Sep 14, 2018 7:24 am
- Python phenograph classification
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- Phenograph - defining cluster marker 'positivity'
by jamesaries » Wed Sep 05, 2018 8:49 am - 3 Replies
- 7036 Views
- Last post by jamesaries
Mon Sep 10, 2018 8:16 pm
- Phenograph - defining cluster marker 'positivity'
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- Optimal CITRUS settings
by jamesaries » Fri Aug 17, 2018 12:13 pm
- 0 Replies
- 3671 Views
- Last post by jamesaries
Fri Aug 17, 2018 12:13 pm
- Optimal CITRUS settings
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- Question about isotype control in Phosphorylation staining
by XMUCyTOF » Fri Aug 10, 2018 9:36 am - 1 Replies
- 4854 Views
- Last post by BjornZ
Mon Aug 13, 2018 2:25 am
- Question about isotype control in Phosphorylation staining
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- CyTOFKIT marker expression heatmap data export
by SHIPINGCYTOF » Tue Jul 31, 2018 2:27 am - 0 Replies
- 3570 Views
- Last post by SHIPINGCYTOF
Tue Jul 31, 2018 2:27 am
- CyTOFKIT marker expression heatmap data export
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- Cytofkit Cell counts
by TomCyToF » Mon Jul 23, 2018 8:36 pm
- 5 Replies
- 6988 Views
- Last post by ErinSimonds
Mon Jul 30, 2018 3:09 pm
- Cytofkit Cell counts
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- compare data from different runs?
by nuonuo56924 » Thu Jul 05, 2018 7:49 pm - 3 Replies
- 5921 Views
- Last post by Verhoeff
Thu Jul 26, 2018 6:42 am
- compare data from different runs?
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- data analysis from multiple runs
by nuonuo56924 » Thu Jul 26, 2018 12:43 am
- 0 Replies
- 3615 Views
- Last post by nuonuo56924
Thu Jul 26, 2018 12:43 am
- data analysis from multiple runs
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- CellCNN Installation
by taxkourel » Tue Jul 03, 2018 8:26 pm - 2 Replies
- 5047 Views
- Last post by taxkourel
Tue Jul 03, 2018 8:46 pm
- CellCNN Installation
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- database of all available analysis tools
by lwagar » Wed Jun 20, 2018 5:54 pm - 8 Replies
- 13818 Views
- Last post by lwagar
Wed Jun 27, 2018 6:20 pm
- database of all available analysis tools
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- Catalyst Pre-Processed file in Cytobank
by CRStevens » Thu Jun 21, 2018 7:54 pm
- 3 Replies
- 6074 Views
- Last post by CRStevens
Mon Jun 25, 2018 3:08 pm
- Catalyst Pre-Processed file in Cytobank
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- Keep the same viSNE plot when clustering...
1, 2 by Nomeansno » Tue May 29, 2018 9:54 pm
- 13 Replies
- 16872 Views
- Last post by ErinSimonds
Sat Jun 02, 2018 11:01 pm
- Keep the same viSNE plot when clustering...
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- Phenograph
1, 2 by GregHopkins » Wed Jan 31, 2018 4:07 pm
- 13 Replies
- 20805 Views
- Last post by ErinSimonds
Wed May 16, 2018 6:11 pm
- Phenograph
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- Problems with expression level plots in Cytofkit
by AndrewD » Thu Apr 12, 2018 8:37 am - 7 Replies
- 10774 Views
- Last post by ErinSimonds
Mon Apr 30, 2018 7:01 pm
- Problems with expression level plots in Cytofkit
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- Kaluza for 2-D analysis
by JoB1984 » Fri Mar 23, 2018 5:27 pm - 0 Replies
- 3781 Views
- Last post by JoB1984
Fri Mar 23, 2018 5:27 pm
- Kaluza for 2-D analysis
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- Normalization without all bead channels?
1, 2by ssivajothi » Fri Mar 09, 2018 6:20 pm - 12 Replies
- 13902 Views
- Last post by mleipold
Mon Mar 12, 2018 2:54 pm
- Normalization without all bead channels?
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- Statistical Analysis of Perturbation Response (SARA)
by AndrewD » Thu Mar 01, 2018 11:09 am - 0 Replies
- 3634 Views
- Last post by AndrewD
Thu Mar 01, 2018 11:09 am
- Statistical Analysis of Perturbation Response (SARA)
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