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2022-Ganesan et al-preprint

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mleipold

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Posts: 4300

Joined: Fri Nov 01, 2013 5:30 pm

Location: Stanford HIMC, CA, USA

Post Mon Jul 25, 2022 3:32 pm

2022-Ganesan et al-preprint

"Imputing abundances and inferring direction of associations between histone modifications using neural processes"
Ananthakrishnan Ganesan, Denis Dermadi, Laurynas Kalesinskas, Michele Donato, Rosalie Sowers, Paul J. Utz, Purvesh Khatri
bioRxiv, posted July 22, 2022
https://doi.org/10.1101/2022.07.21.501033

- will update when/if this is peer-reviewed and published

- "EpiTOF data

The 158 healthy subjects were enlisted through 6 cohorts and their EpiTOF profiles were measured across 25 experiments (Table S2). We have previously described all 6 cohorts-the Atlanta cohort[8] (50 subjects, 13 experiments), BR (24 subjects, 2 experiments) and Twins cohorts[13] (40 subjects, 2 experiments), Oklahoma cohort[34] (18 subjects, 4 experiments), Stanford (16 subjects, 3 experiments) and South Africa cohorts[15] (10 subjects, 1 experiment). The effects of TIV were studied on 21 subjects from the Atlanta cohort. The Day 30 time point samples were not present in any of training, validation, or test sets."

Atlanta cohort: 2021-Wimmers et al-Cell
Twins (and BR?): 2018-Cheung et al-Cell
Oklahoma: 2021-Slight-Webb et al-preprint
South Africa (and Stanford?): 2022-Dermadi et al-preprint
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mleipold

Guru

Posts: 4300

Joined: Fri Nov 01, 2013 5:30 pm

Location: Stanford HIMC, CA, USA

Post Mon Jan 09, 2023 4:40 pm

Re: 2022-Ganesan et al-preprint

Now published:

iScience. 2022, 26, 105756
https://doi.org/10.1016/j.isci.2022.105756

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