Post Mon Jun 22, 2020 4:47 pm

2020-Bodenheimer et al-preprint

"FastPG: Fast clustering of millions of single cells"
Tom Bodenheimer, Mahantesh Halappanavar, Stuart Jefferys, Ryan Gibson, Siyao Liu, Peter J. Mucha, Natalie Stanley, Joel S. Parker, Sara R. Selitsky
bioRxiv, posted June 20, 2020
https://doi.org/10.1101/2020.06.19.159749

- will update when/if this is peer-reviewed and published

"We evaluated the performance of FastPG using four publicly available “gold standard” mass cytometry data sets from Weber et al.10; all of which were derived from bone marrow: Levine32 (104,184 cells, 32 protein markers and 14 defined cell types), Levine13 (81,747 cells, 13 protein markers, and 24 defined cell types), Samusik01 (53,173 cells, 37 protein markers, and 24 defined cell types), and SamusikAll (514,386 cells, 37 protein markers, and 24 defined cell types)."
- 2016-Weber et al-Cytometry A: https://flowrepository.org/id/FR-FCM-ZZPH (2016-Samusik et al-Nat Methods, 2015-Levine et al-Cell)

Also reuses 2019-Gaudilliere et al-J Dent Res (https://flowrepository.org/id/FR-FCM-ZYT6)