2014-Finak et al-PLOS Comput. Biol.

"OpenCyto: An Open Source Infrastructure for Scalable, Robust, Reproducible, and Automated, End-to-End Flow Cytometry Data Analysis"
Greg Finak, Jacob Frelinger, Wenxin Jiang, Evan W. Newell, John Ramey, Mark M. Davis, Spyros A. Kalams, Stephen C. De Rosa, Raphael Gottardo
PLOS Computational Biology, 2014, 10(8): e1003806
http://dx.doi.org/10.1371/journal.pcbi.1003806
-Bioconductor-based flow templating; one example data set is CyTOF data, from Newell et al, Immunity (2012)
Greg Finak, Jacob Frelinger, Wenxin Jiang, Evan W. Newell, John Ramey, Mark M. Davis, Spyros A. Kalams, Stephen C. De Rosa, Raphael Gottardo
PLOS Computational Biology, 2014, 10(8): e1003806
http://dx.doi.org/10.1371/journal.pcbi.1003806
-Bioconductor-based flow templating; one example data set is CyTOF data, from Newell et al, Immunity (2012)