CyTOForum

"Multi-site reproducibility of a human immunophenotyping assay in whole blood and peripheral blood mononuclear cells preparations using CyTOF technology coupled with Maxpar Pathsetter, an automated data analysis system"
Bagwell CB, Hunsberger B, Hill B, Herbert D, Bray C, Selvanantham T, Li S, Villasboas JC, Pavelko K, Strausbauch M, Rahman A, Kelly G, Asgharzadeh S, Gomez-Cabrero A, Behbehani G, Chang H, Lyberger J, Montgomery R, Zhao Y, Inokuma M, Goldberger O, Stelzer G
Cytometry B Clin Cytom. 2019
https://doi.org/10.1002/cyto.b.21858

- no dataset accession number given

I hope Fluidigm makes the data publicly available -- it will be very helpful to other method developers.

This seems like the same data as Fluidigm used for the white paper on the DIP panel, of which a part was made available on Cytobank (I took it from the Premium server, don't know if it is on the public one) under the name Fluidigm_Maxpar Direct Immune Profiling Assay_201325_Gating Example_v1.0 (Public)

The filenames don't seem to directly match the files listed in the paper though, maybe one of the authors can attest to what happened?

Cheers,
Jan

I have heard that the data is available on Premium Cytobank, unfortunately many people cannot access that. I hope that Fluidigm can supply it through open means such as FlowRepository.

Available on Premium Cytobank: http://premium.cytobank.org/cytobank/experiments/221569