Tue Jan 19, 2021 7:17 pm
2021-Narayan et al-Nat Biotechnol
"Assessing single-cell transcriptomic variability through density-preserving data visualization"
Ashwin Narayan, Bonnie Berger, Hyunghoon Cho
Nat Biotechnol. 2021
https://doi.org/10.1038/s41587-020-00801-7
alternatively BioRXiv version (14 May 2020)
- examplified with scRNAseq; no data concerning cytometry.
- code availability:
We provide the software for den-SNE and densMAP in the densVis package available at http://densvis.csail.mit.edu/ and https://github.com/hhcho/densvis. Our densMAP implementation is also available as part of the Python umap package (https://github.com/lmcinnes/umap).
Ashwin Narayan, Bonnie Berger, Hyunghoon Cho
Nat Biotechnol. 2021
https://doi.org/10.1038/s41587-020-00801-7
alternatively BioRXiv version (14 May 2020)
- examplified with scRNAseq; no data concerning cytometry.
- code availability:
We provide the software for den-SNE and densMAP in the densVis package available at http://densvis.csail.mit.edu/ and https://github.com/hhcho/densvis. Our densMAP implementation is also available as part of the Python umap package (https://github.com/lmcinnes/umap).