CyTOF data analysis
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Please be as geeky as possible. Reference, reference, reference.
Also, please note that this is a mixed bag of math-gurus and mathematically challenged, so choose your words wisely
Please be as geeky as possible. Reference, reference, reference.
Also, please note that this is a mixed bag of math-gurus and mathematically challenged, so choose your words wisely
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- Kappa & LAmbda clones in CyTOF
by msinger » Tue Feb 15, 2022 7:59 pm - 2 Replies
- 10236 Views
- Last post by DannyG
Fri Aug 05, 2022 7:17 pm
- Kappa & LAmbda clones in CyTOF
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- Topics
- Replies
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- TIMESTEP for Cytof data
by CostaVUmc » Tue Jun 05, 2018 6:49 am - 6 Replies
- 6332 Views
- Last post by XMUCyTOF
Mon Aug 19, 2019 8:19 am
- TIMESTEP for Cytof data
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- IMD file conversion
by dahern » Fri Sep 09, 2016 1:22 pm
- 7 Replies
- 9555 Views
- Last post by mleipold
Tue Aug 13, 2019 5:45 pm
- IMD file conversion
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- Compare results from different technologies
by Algebio » Tue Aug 13, 2019 3:26 pm - 0 Replies
- 1786 Views
- Last post by Algebio
Tue Aug 13, 2019 3:26 pm
- Compare results from different technologies
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- "Time" channel units
by dtelad11 » Thu Aug 08, 2019 9:26 pm - 7 Replies
- 4731 Views
- Last post by dtelad11
Thu Aug 08, 2019 10:41 pm
- "Time" channel units
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- Cluster identification
by Algebio » Sun Jul 21, 2019 5:34 pm - 4 Replies
- 3269 Views
- Last post by technolust
Thu Jul 25, 2019 1:46 am
- Cluster identification
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- Transformation methods and flow data
by nkhanbham » Fri Jun 21, 2019 5:16 pm
- 1 Replies
- 4578 Views
- Last post by sgranjeaud
Sat Jun 22, 2019 1:45 pm
- Transformation methods and flow data
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- Large analysis of tSNE and UMAP parameters
by sgranjeaud » Fri Jun 14, 2019 9:30 am - 6 Replies
- 4836 Views
- Last post by PaulNL
Fri Jun 21, 2019 9:09 am
- Large analysis of tSNE and UMAP parameters
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- Gating output-addl analysis-issue of dependent pops
by mleipold » Mon Jun 10, 2019 8:30 pm - 1 Replies
- 2101 Views
- Last post by AnnaBelkina
Tue Jun 11, 2019 2:43 pm
- Gating output-addl analysis-issue of dependent pops
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- Anybody able to run CytoClustR with Cytobank API
by albertapaul » Mon Jun 10, 2019 2:27 am - 0 Replies
- 1734 Views
- Last post by albertapaul
Mon Jun 10, 2019 2:27 am
- Anybody able to run CytoClustR with Cytobank API
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- Beckman Coulter purchased Cytobank
by mleipold » Tue Jun 04, 2019 3:45 pm - 1 Replies
- 2138 Views
- Last post by dtelad11
Tue Jun 04, 2019 5:22 pm
- Beckman Coulter purchased Cytobank
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- Gating in R/Analysis
by KHLACU » Thu May 23, 2019 5:24 am - 0 Replies
- 1802 Views
- Last post by KHLACU
Thu May 23, 2019 5:24 am
- Gating in R/Analysis
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- FlowVS for transformation
by YWzhang » Thu May 02, 2019 2:56 pm - 2 Replies
- 3553 Views
- Last post by YWzhang
Mon May 13, 2019 4:06 pm
- FlowVS for transformation
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- Extending the axis for CyTOF data
by AdeebR » Wed Jun 11, 2014 1:44 pm
- 6 Replies
- 13221 Views
- Last post by BjornZ
Mon Apr 29, 2019 6:33 pm
- Extending the axis for CyTOF data
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- Healthy control PBMC replicates-dataset release
by mleipold » Wed Apr 17, 2019 3:37 pm - 0 Replies
- 2847 Views
- Last post by mleipold
Wed Apr 17, 2019 3:37 pm
- Healthy control PBMC replicates-dataset release
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- Debarcoding efficiency affected by 89Y oxide into Pd105
1, 2 by jcvillasboas » Wed Mar 13, 2019 10:04 pm
- 13 Replies
- 8926 Views
- Last post by dtelad11
Thu Mar 21, 2019 1:43 pm
- Debarcoding efficiency affected by 89Y oxide into Pd105
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- SPADE script to install package in R
by fcl54643 » Tue Feb 12, 2019 9:32 pm - 4 Replies
- 3561 Views
- Last post by mleipold
Thu Feb 14, 2019 5:50 pm
- SPADE script to install package in R
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- Standardising exported data with different channels
by levelup » Thu Jan 31, 2019 10:17 am - 5 Replies
- 3888 Views
- Last post by dtelad11
Fri Feb 08, 2019 8:17 pm
- Standardising exported data with different channels
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- Using multiple random starting seeds in FlowSOM - How?
by mccars » Wed Feb 06, 2019 1:05 pm - 1 Replies
- 2744 Views
- Last post by PaulNL
Wed Feb 06, 2019 2:53 pm
- Using multiple random starting seeds in FlowSOM - How?
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- Useful to have list of CyTOF datasets?
by mleipold » Mon May 14, 2018 4:28 pm - 5 Replies
- 5538 Views
- Last post by mleipold
Wed Dec 12, 2018 8:53 pm
- Useful to have list of CyTOF datasets?
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- separating type (lineage) and state (functional) markers
by markrobinsonca » Mon Nov 26, 2018 8:02 pm - 2 Replies
- 2603 Views
- Last post by JamesW
Tue Nov 27, 2018 5:09 am
- separating type (lineage) and state (functional) markers
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- CytofKit error messages
by jamesaries » Sat Nov 17, 2018 6:13 pm - 0 Replies
- 1889 Views
- Last post by jamesaries
Sat Nov 17, 2018 6:13 pm
- CytofKit error messages
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- Pe'er lab analysis tools are taken off the web?
by AnnaBelkina » Thu Apr 05, 2018 8:52 pm - 5 Replies
- 6411 Views
- Last post by dtelad11
Fri Nov 02, 2018 11:00 pm
- Pe'er lab analysis tools are taken off the web?
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- Phenograph - choice of settings input in to cytofkit?
by jamesaries » Tue Jun 12, 2018 2:01 pm
- 6 Replies
- 7694 Views
- Last post by albertapaul
Thu Nov 01, 2018 3:35 am
- Phenograph - choice of settings input in to cytofkit?
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- Compensated files in Cytobank
by SaraAli » Sun Sep 30, 2018 4:47 pm - 3 Replies
- 4222 Views
- Last post by sgranjeaud
Tue Oct 16, 2018 8:48 pm
- Compensated files in Cytobank
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