CyTOF data analysis
Forum rules
Please be as geeky as possible. Reference, reference, reference.
Also, please note that this is a mixed bag of math-gurus and mathematically challenged, so choose your words wisely
Please be as geeky as possible. Reference, reference, reference.
Also, please note that this is a mixed bag of math-gurus and mathematically challenged, so choose your words wisely
-
- Announcements
- Replies
- Views
- Last post
-
- Kappa & LAmbda clones in CyTOF
by msinger » Tue Feb 15, 2022 7:59 pm - 2 Replies
- 8651 Views
- Last post by DannyG
Fri Aug 05, 2022 7:17 pm
- Kappa & LAmbda clones in CyTOF
-
- Topics
- Replies
- Views
- Last post
-
- Recommendation on an example data
by jonsnow » Tue Nov 03, 2020 4:36 pm - 2 Replies
- 2732 Views
- Last post by jonsnow
Tue Nov 03, 2020 10:03 pm
- Recommendation on an example data
-
- Data pre-processing
by selitsky » Thu Apr 26, 2018 12:28 pm - 9 Replies
- 9567 Views
- Last post by tomash
Tue Nov 03, 2020 7:04 am
- Data pre-processing
-
- Problems with Cytof workflow (Nowicka et al)
1, 2by nkhanbham » Wed Aug 01, 2018 2:15 pm - 14 Replies
- 12048 Views
- Last post by juliam
Mon Nov 02, 2020 5:18 pm
- Problems with Cytof workflow (Nowicka et al)
-
- Uploading gates to cytobank
by marthabrainard » Wed Oct 07, 2020 6:01 pm - 0 Replies
- 1962 Views
- Last post by marthabrainard
Wed Oct 07, 2020 6:01 pm
- Uploading gates to cytobank
-
- Concatenating FCS files
by komal2000 » Thu Sep 17, 2020 8:23 am - 5 Replies
- 3082 Views
- Last post by komal2000
Fri Sep 18, 2020 7:38 am
- Concatenating FCS files
-
- Cytosplore crashes with Mass Cytometry files
by Giorgio » Thu Sep 10, 2020 3:21 pm - 1 Replies
- 2516 Views
- Last post by mleipold
Thu Sep 10, 2020 3:32 pm
- Cytosplore crashes with Mass Cytometry files
-
- Update of Rphenograph and Rtsne
by sgranjeaud » Thu Jun 11, 2020 5:18 pm - 5 Replies
- 6849 Views
- Last post by tomash
Fri Aug 21, 2020 4:50 am
- Update of Rphenograph and Rtsne
-
- FCS file nomenclature and consistency
by mleipold » Tue Jul 14, 2020 4:35 pm - 0 Replies
- 1932 Views
- Last post by mleipold
Tue Jul 14, 2020 4:35 pm
- FCS file nomenclature and consistency
-
- Cytofkit treats two panels edited by Premessa as different??
1, 2
by sudhcha » Fri May 08, 2020 10:23 am
- 10 Replies
- 6132 Views
- Last post by sudhcha
Mon May 11, 2020 11:39 am
- Cytofkit treats two panels edited by Premessa as different??
-
- Quantile normalisation of batches
by sgranjeaud » Tue Apr 28, 2020 9:17 pm - 0 Replies
- 2110 Views
- Last post by sgranjeaud
Tue Apr 28, 2020 9:17 pm
- Quantile normalisation of batches
-
- concatenatings samples from different runs-viSNE
by narulam » Mon Mar 30, 2020 1:43 am - 2 Replies
- 2812 Views
- Last post by narulam
Tue Mar 31, 2020 4:24 am
- concatenatings samples from different runs-viSNE
-
- Concatenating barcoded samples from different runs
by mdmanurung » Sat Mar 21, 2020 10:15 am - 2 Replies
- 2785 Views
- Last post by sgranjeaud
Tue Mar 24, 2020 4:57 pm
- Concatenating barcoded samples from different runs
-
- Auto-gating Gaussian and/or cells?
1, 2by jimbomahoney » Tue Dec 03, 2019 12:11 pm - 19 Replies
- 9823 Views
- Last post by jimbomahoney
Mon Mar 23, 2020 8:03 am
- Auto-gating Gaussian and/or cells?
-
- LMA CyTOF Core Data Analysis Seminar #3
by EHaasDFCI » Wed Feb 12, 2020 12:42 pm - 1 Replies
- 2493 Views
- Last post by eganio
Wed Feb 12, 2020 3:15 pm
- LMA CyTOF Core Data Analysis Seminar #3
-
- Fluidigm debarcoding metrics
by dtelad11 » Tue Jan 14, 2020 2:18 pm - 1 Replies
- 2250 Views
- Last post by EHaasDFCI
Wed Feb 12, 2020 12:38 pm
- Fluidigm debarcoding metrics
-
- cytofkit: take care of file names
by sgranjeaud » Mon Jan 20, 2020 8:23 pm - 0 Replies
- 2290 Views
- Last post by sgranjeaud
Mon Jan 20, 2020 8:23 pm
- cytofkit: take care of file names
-
- Randomization / randomisation consensus
by jimbomahoney » Wed Nov 13, 2019 12:49 pm
- 9 Replies
- 5829 Views
- Last post by geopap
Fri Nov 15, 2019 10:20 am
- Randomization / randomisation consensus
-
- Data Analysis Seminar Series at Dana-Farber
by EHaasDFCI » Fri Oct 25, 2019 8:56 pm
- 1 Replies
- 3548 Views
- Last post by EHaasDFCI
Wed Nov 06, 2019 2:04 pm
- Data Analysis Seminar Series at Dana-Farber
-
- Cytofkit removed from Bioconductor with v3.9
by markyyy » Thu Jul 18, 2019 3:50 pm - 5 Replies
- 6085 Views
- Last post by Kjwaller
Thu Oct 17, 2019 2:54 pm
- Cytofkit removed from Bioconductor with v3.9
-
- Modifying channels from the FCS files
1, 2by avinash1 » Thu Sep 26, 2019 9:41 pm - 11 Replies
- 8446 Views
- Last post by dtelad11
Wed Oct 16, 2019 4:32 pm
- Modifying channels from the FCS files
-
- Comparing xml files from different softwares
by komal2000 » Tue Oct 08, 2019 7:38 am - 0 Replies
- 2429 Views
- Last post by komal2000
Tue Oct 08, 2019 7:38 am
- Comparing xml files from different softwares
-
- Quick overview plots like Cytobank - R script
by jimbomahoney » Tue May 28, 2019 1:58 pm - 4 Replies
- 4427 Views
- Last post by jimbomahoney
Mon Sep 30, 2019 7:33 am
- Quick overview plots like Cytobank - R script
-
- Log width bar plots like PlotViewer - R script
by jimbomahoney » Fri Aug 23, 2019 7:20 am - 0 Replies
- 2263 Views
- Last post by jimbomahoney
Fri Aug 23, 2019 7:20 am
- Log width bar plots like PlotViewer - R script
-
- TIMESTEP for Cytof data
by CostaVUmc » Tue Jun 05, 2018 6:49 am - 6 Replies
- 6212 Views
- Last post by XMUCyTOF
Mon Aug 19, 2019 8:19 am
- TIMESTEP for Cytof data
-
- IMD file conversion
by dahern » Fri Sep 09, 2016 1:22 pm
- 7 Replies
- 9420 Views
- Last post by mleipold
Tue Aug 13, 2019 5:45 pm
- IMD file conversion
Who is online
Users browsing this forum: No registered users and 1 guest
Forum permissions
You cannot post new topics in this forum
You cannot reply to topics in this forum
You cannot edit your posts in this forum
You cannot delete your posts in this forum
You cannot post attachments in this forum