CyTOF data analysis
Forum rules
Please be as geeky as possible. Reference, reference, reference.
Also, please note that this is a mixed bag of math-gurus and mathematically challenged, so choose your words wisely
Please be as geeky as possible. Reference, reference, reference.
Also, please note that this is a mixed bag of math-gurus and mathematically challenged, so choose your words wisely
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- Kappa & LAmbda clones in CyTOF
by msinger » Tue Feb 15, 2022 7:59 pm - 2 Replies
- 8651 Views
- Last post by DannyG
Fri Aug 05, 2022 7:17 pm
- Kappa & LAmbda clones in CyTOF
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- Topics
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- Data analysis development-wishlists and datasets?
1, 2by mleipold » Wed Nov 08, 2017 4:08 pm - 14 Replies
- 18005 Views
- Last post by vmotta
Thu Dec 07, 2017 7:16 am
- Data analysis development-wishlists and datasets?
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- Cytof vs. ssRNAseq
by Osiris » Tue Nov 14, 2017 1:02 pm - 4 Replies
- 6251 Views
- Last post by Osiris
Wed Nov 15, 2017 8:53 am
- Cytof vs. ssRNAseq
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- t-SNE in R
1, 2by mallahi » Wed Oct 04, 2017 3:37 pm - 11 Replies
- 18364 Views
- Last post by ErinSimonds
Mon Nov 06, 2017 5:34 pm
- t-SNE in R
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- FlowSOM Help
by CRStevens » Wed Jun 14, 2017 4:29 pm
- 3 Replies
- 7507 Views
- Last post by ErinSimonds
Mon Nov 06, 2017 5:31 pm
- FlowSOM Help
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- Analysis Software Platform
by fcl54643 » Wed Aug 16, 2017 6:11 pm - 6 Replies
- 8130 Views
- Last post by SeanBurke
Tue Oct 31, 2017 6:33 pm
- Analysis Software Platform
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- Verity Cen-se?
1, 2 by dtelad11 » Mon Sep 11, 2017 11:59 pm
- 18 Replies
- 17703 Views
- Last post by dtelad11
Fri Oct 27, 2017 12:52 am
- Verity Cen-se?
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- Avoiding tailored gates
by avinash1 » Fri Oct 27, 2017 12:33 am - 0 Replies
- 2403 Views
- Last post by avinash1
Fri Oct 27, 2017 12:33 am
- Avoiding tailored gates
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- Monte-Carlo Simulation
by fountain » Fri Oct 20, 2017 10:41 pm - 2 Replies
- 4070 Views
- Last post by bc2zbUVA
Mon Oct 23, 2017 2:48 pm
- Monte-Carlo Simulation
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- Matlab normalizer question
by ddelalca » Thu Oct 19, 2017 4:45 pm - 1 Replies
- 3402 Views
- Last post by mleipold
Thu Oct 19, 2017 5:38 pm
- Matlab normalizer question
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- CyTOF quality data check
by mallahi » Thu Sep 21, 2017 8:14 pm - 1 Replies
- 3534 Views
- Last post by mleipold
Mon Sep 25, 2017 8:57 pm
- CyTOF quality data check
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- Invalid FCS file generation from FlowJo
by lwagar » Mon Aug 21, 2017 8:32 pm - 1 Replies
- 3894 Views
- Last post by mleipold
Tue Aug 29, 2017 6:11 pm
- Invalid FCS file generation from FlowJo
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- CYTO 2017-t/SNE tutorial now on CYTOU
by mleipold » Tue Jul 25, 2017 6:35 pm - 0 Replies
- 3046 Views
- Last post by mleipold
Tue Jul 25, 2017 6:35 pm
- CYTO 2017-t/SNE tutorial now on CYTOU
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- Hypothesis testing (stats) on viSNE data
by jcvillasboas » Wed Jan 04, 2017 2:57 pm
- 6 Replies
- 8490 Views
- Last post by markrobinsonca
Tue Jul 18, 2017 8:33 am
- Hypothesis testing (stats) on viSNE data
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- Intensity of Normalization Beads
1, 2 by FlowjoVA » Tue Feb 28, 2017 6:35 pm
- 12 Replies
- 17232 Views
- Last post by SteinErik
Mon Jul 10, 2017 10:47 am
- Intensity of Normalization Beads
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- Unusual staining in 140-150 range
by nkhanbham » Wed Jun 21, 2017 6:06 pm
- 6 Replies
- 7426 Views
- Last post by GregBehbehani
Fri Jun 23, 2017 6:33 pm
- Unusual staining in 140-150 range
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- The new Gaussian parameters from Helios
by dahern » Mon May 08, 2017 1:15 pm
- 2 Replies
- 6346 Views
- Last post by Chowduck
Mon May 08, 2017 3:46 pm
- The new Gaussian parameters from Helios
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- Matlab Normalizer
by skowli » Thu Apr 06, 2017 5:01 pm
- 2 Replies
- 4426 Views
- Last post by skowli
Thu Apr 06, 2017 5:48 pm
- Matlab Normalizer
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- VISNE and Zero values in CyTOF data
by nkhanbham » Fri Mar 17, 2017 7:16 pm
- 5 Replies
- 7486 Views
- Last post by nkhanbham
Wed Mar 29, 2017 9:26 am
- VISNE and Zero values in CyTOF data
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- Does anybody know how DVS calculates normalization factors?
by tesla276 » Thu Feb 26, 2015 9:01 pm
- 8 Replies
- 8494 Views
- Last post by vmotta
Wed Feb 15, 2017 9:28 pm
- Does anybody know how DVS calculates normalization factors?
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- Gate threshold for cytokines
by prybakowska » Sat Feb 11, 2017 5:37 pm - 1 Replies
- 4156 Views
- Last post by mleipold
Mon Feb 13, 2017 4:32 pm
- Gate threshold for cytokines
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- Statistical power calculation
by bc2zbUVA » Wed Feb 08, 2017 9:59 pm - 3 Replies
- 6511 Views
- Last post by bc2zbUVA
Thu Feb 09, 2017 12:58 am
- Statistical power calculation
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- Negatives split in 4
by marodon » Thu Dec 08, 2016 10:37 am - 1 Replies
- 3483 Views
- Last post by mleipold
Thu Dec 08, 2016 4:00 pm
- Negatives split in 4
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- Determining the divergence between samples
by RSchackmann » Fri Sep 09, 2016 12:17 am
- 6 Replies
- 6997 Views
- Last post by sfauteux
Mon Nov 07, 2016 2:55 pm
- Determining the divergence between samples
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- "OTHER" section in Fluidigm FCS files
by dtelad11 » Wed Nov 02, 2016 7:22 pm - 0 Replies
- 2614 Views
- Last post by dtelad11
Wed Nov 02, 2016 7:22 pm
- "OTHER" section in Fluidigm FCS files
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- visNE plot with phenograph gates
by MarcelaAH » Fri May 20, 2016 4:44 am - 2 Replies
- 5290 Views
- Last post by dtelad11
Wed Nov 02, 2016 3:35 pm
- visNE plot with phenograph gates
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